Basic Information
Locus ID:
AsparagusV1_07.3002.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 124178168 | 124184899 | - | AsparagusV1_07.3002.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 46,015.10 Da | 57.23 | 51.17 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 303 | 360 | 2.9E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 134 | 190 | 1.3E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 294 | 362 | 2.22E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 131 | 192 | 1.96E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 125 | 193 | 2.1E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 287 | 363 | 4.2E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 302 | 361 | 5.9E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 133 | 191 | 9.0E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 134 | 192 | 23.513811 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 297 | 362 | 38.893528 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 277 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_020273957.1 | probable WRKY transcription factor 4 [Asparagus officinalis] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5P1EHZ6 | WRKY transcription factor 3 OS=Asparagus officinalis OX=4686 GN=A4U43_C07F30020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology