Basic Information
Locus ID:
AsparagusV1_07.2953.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 121064642 | 121080294 | + | AsparagusV1_07.2953.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 100,459.27 Da | 34.31 | 78.66 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 102 | 297 | 3.02407E-96 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 115 | 275 | 2.5E-11 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 439 | 730 | 9.4E-105 | IPR001404 |
| Pfam | PF01090 | Ribosomal protein S19e | 773 | 884 | 1.6E-45 | IPR001266 |
| Pfam | PF00183 | Hsp90 protein | 280 | 437 | 1.0E-49 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 604 | 724 | 1.7E-29 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 92 | 307 | 1.31E-60 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 357 | 581 | 1.14E-62 | IPR020568 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 772 | 886 | 1.03E-44 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 746 | 887 | 3.0E-58 | IPR036388 |
| Gene3D | G3DSA:3.40.50.11260 | - | 494 | 580 | 8.3E-32 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 355 | 439 | 8.7E-28 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 440 | 493 | 1.3E-14 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 84 | 322 | 1.1E-86 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 581 | 727 | 2.9E-48 | IPR037196 |
| SMART | SM01413 | Ribosomal_S19e_2 | 760 | 887 | 2.4E-64 | IPR001266 |
| SMART | SM00387 | HKATPase_4 | 115 | 277 | 1.1E-4 | IPR003594 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 113 | 122 | - | IPR019805 |
| ProSitePatterns | PS00628 | Ribosomal protein S19e signature. | 835 | 854 | - | IPR018277 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 283 | 301 | 9.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 265 | 282 | 9.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 163 | 180 | 9.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 93 | 113 | 9.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 210 | 232 | 9.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 181 | 198 | 9.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 114 | 136 | 9.3E-64 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 90 | 725 | 22.436983 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 337 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07770.1 | HEAT SHOCK PROTEIN 89.1. | 0 |
| RefSeq | XP_020272906.1 | heat shock protein 90-6, mitochondrial-like [Asparagus officinalis] | 0 |
| F4JFN3 | Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EFT4 | HATPase_c domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F29530 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology