Basic Information
Locus ID:
AsparagusV1_07.2391.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 85713417 | 85720488 | + | AsparagusV1_07.2391.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 35,851.59 Da | 27.12 | 67.73 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 160 | 174 | 0.074 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 220 | 235 | 0.0029 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 92 | 124 | 1.9E-4 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 8 | 302 | 1.96E-21 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 22 | 308 | 2.2E-28 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020276088.1 | uncharacterized protein LOC109850488 [Asparagus officinalis] | 0 |
| TrEMBL | A0A5P1EHW3 | WD40 repeat protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F23910 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology