Basic Information
Locus ID:
AsparagusV1_07.1856.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 63051674 | 63075817 | + | AsparagusV1_07.1856.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 99,280.07 Da | 40.69 | 77.60 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 552 | 592 | 1.33477E-16 | - |
| Pfam | PF16135 | Tify domain binding domain | 486 | 535 | 1.2E-18 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 274 | 329 | 3.9E-19 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 553 | 593 | 1.5E-8 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 639 | 694 | 2.04E-8 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 540 | 594 | 5.55E-17 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 792 | 879 | 3.16E-6 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 636 | 698 | 8.0E-12 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 735 | 895 | 8.6E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 539 | 618 | 9.5E-19 | IPR013083 |
| SMART | SM00249 | PHD_3 | 552 | 593 | 5.4E-11 | IPR001965 |
| SMART | SM00249 | PHD_3 | 639 | 696 | 0.025 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 550 | 595 | 10.486799 | IPR019787 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 756 | 898 | 9.456704 | IPR000182 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 553 | 592 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 225 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_020276778.1 | uncharacterized protein LOC109851083 [Asparagus officinalis] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EGC8 | PHD-type domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F18560 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology