Basic Information
Locus ID:
AsparagusV1_07.1497.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 50044745 | 50050920 | + | AsparagusV1_07.1497.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 59,402.06 Da | 29.57 | 107.16 | 0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 30 | 442 | 3.0E-58 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 145 | 197 | 4.6E-15 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 25 | 468 | 3.4E-76 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 85 | 96 | 9.0E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 99 | 113 | 9.0E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 153 | 163 | 9.0E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 114 | 122 | 9.0E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_020275092.1 | sodium/hydrogen exchanger 2-like [Asparagus officinalis] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1EH84 | Sodium/hydrogen exchanger OS=Asparagus officinalis OX=4686 GN=A4U43_C07F14970 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology