Basic Information
Locus ID:
AsparagusV1_07.1154.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Bromo adjacent homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 34853949 | 34855540 | - | AsparagusV1_07.1154.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 18,025.31 Da | 36.33 | 64.77 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01426 | BAH domain | 5 | 106 | 4.8E-18 | IPR001025 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 101 | 134 | 2.44E-8 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 104 | 149 | 6.6E-8 | IPR013083 |
| Gene3D | G3DSA:2.30.30.490 | - | 1 | 103 | 3.1E-24 | IPR043151 |
| SMART | SM00439 | BAH_4 | 1 | 107 | 4.5E-30 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 1 | 107 | 20.988863 | IPR001025 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39100.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. Putative transcription factor containing a PHD finger and BAH motif, required for normal development | 0 |
| RefSeq | XP_020271781.1 | chromatin remodeling protein EBS-like [Asparagus officinalis] | 0 |
| Q9FEN9 | Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EB73 | BAH domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F11540 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology