Basic Information
Locus ID:
AsparagusV1_07.1152.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
CIPK17
Description:
CBL-interacting serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 34825849 | 34831266 | + | AsparagusV1_07.1152.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 33,230.53 Da | 33.13 | 83.61 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 149 | 263 | 4.18075E-36 | - |
| Pfam | PF03822 | NAF domain | 145 | 203 | 6.8E-19 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 14 | 81 | 1.2E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 81 | 2.53E-19 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 143 | 268 | 6.0E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 84 | 6.9E-24 | - |
| SMART | SM00220 | serkin_6 | 14 | 160 | 0.0037 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 14 | 296 | 14.859795 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 143 | 167 | 11.899865 | IPR018451 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 20 | 43 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17510.1 | CBL-interacting protein kinase 1. Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2. | 0 |
| RefSeq | XP_020274635.1 | CBL-interacting protein kinase 1-like [Asparagus officinalis] | 0 |
| Q9LGV5 | CBL-interacting protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1EGB7 | non-specific serine/threonine protein kinase OS=Asparagus officinalis OX=4686 GN=A4U43_C07F11520 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 3 | Ag5G01794, Ag7G01958, Ag8G01826 |
| Arecaceae | Cocos nucifera | 1 | contig68889702G000010 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_07.1091.V1.1, AsparagusV1_07.1152.V1.1 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g15840 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G015600 |
| Salicaceae | Populus euphratica | 1 | populus_peu12105 |