Basic Information
Locus ID:
AsparagusV1_06.902.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
PID2
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 21212911 | 21239134 | - | AsparagusV1_06.902.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.01 | 78,066.03 Da | 59.25 | 81.99 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 524 | 649 | 4.0E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 390 | 457 | 1.2E-15 | IPR000719 |
| Pfam | PF05176 | ATP10 protein | 42 | 238 | 2.1E-30 | IPR007849 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 387 | 671 | 8.73E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 536 | 667 | 7.7E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 388 | 456 | 9.4E-21 | - |
| SMART | SM00220 | serkin_6 | 329 | 649 | 1.8E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 152 | 649 | 28.145754 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 428 | 440 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 530 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 267 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26700.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes PID2, a homolog of PID. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons. | 0 |
| RefSeq | XP_020270428.1 | LOW QUALITY PROTEIN: protein kinase PINOID 2-like [Asparagus officinalis] | 0 |
| Q64FQ2 | Protein kinase PINOID 2 OS=Arabidopsis thaliana OX=3702 GN=PID2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EMY5 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F9020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg8199 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_21229 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah011647 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g210700 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg11949, Sbi_jg46875 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg21165 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00009500, GOSA_00009503 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl80351, Sgl82813 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000013740, gene:ENSEOMG00000037935 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.9AG0010390, CQ.Regalona.r1.9BG0012230 |
| Anacardiaceae | Pistacia vera | 3 | pistato.v30032350, pistato.v30057450, pistato.v30242530 |
| Apiaceae | Apium graveolens | 1 | Ag10G00646 |
| Arecaceae | Cocos nucifera | 1 | scaffold007047G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708780 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_06.902.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G11149 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G08220.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10008429m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g06870.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g003960.2N, BniB03g002630.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G1699 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G1702 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g05420 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g05750 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG09.798 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00015882 |
| Plumbaginaceae | Limonium bicolor | 5 | Lb2G15098, Lb3G18952, Lb3G20793, Lb3G20795, Lb4G23353 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.1133, BH05.1357, CH05.1335 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0403060, gene-QOZ80_5BG0451470 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0027680.1 |
| Poaceae | Oryza coarctata | 2 | Oco09G003420, Oco10G003410 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g08410.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G069100 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0501661, Pt_Chr0501712 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr01G011610, Chr12G025090, Chr22G014130 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G216100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG013870, gene_TRIDC1BG020490 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G116500.1, TraesCS1B02G136500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb345720_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-18089 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g27779 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG06.1047, evm.TU.LG11.474 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g11750 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_13_RagTag.436 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-30687 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12524 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-22067 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000015l.223 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00015586 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4131 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-22192 |
| Salicaceae | Populus euphratica | 1 | populus_peu35418 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132600501 |
| Solanaceae | Solanum chilense | 1 | SOLCI005772600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107003360 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.3707_chr02_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G1884 |
| Zosteraceae | Zostera marina | 1 | Zosma06g09710.v3.1 |