Basic Information
Locus ID:
AsparagusV1_06.877.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 20700038 | 20702338 | - | AsparagusV1_06.877.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.25 | 40,239.55 Da | 49.03 | 82.48 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 83 | 349 | 3.5E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 351 | 1.85E-29 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 75 | 359 | 1.5E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 79 | 355 | 18.605303 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53320.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020270711.1 | probable inactive receptor kinase At5g58300 [Asparagus officinalis] | 0 |
| Q9FK10 | Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana OX=3702 GN=At5g53320 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EKJ0 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F7740 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30134570 |
| Apiaceae | Apium graveolens | 1 | Ag8G00589 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_06.774.V1.1, AsparagusV1_06.877.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G14097, Ftri7G01338 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00028446 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_16_RagTag.89 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-22335 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4375 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-20395 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000022l.444 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3582 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-6756 |
| Salicaceae | Populus euphratica | 1 | populus_peu34525 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132637065 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114078458 |