Basic Information
Locus ID:
AsparagusV1_06.844.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 19080442 | 19084037 | + | AsparagusV1_06.844.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 22,851.35 Da | 43.95 | 90.60 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 1 | 111 | 2.9E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 112 | 4.32E-29 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 36 | 112 | 4.1E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 35 | 5.1E-7 | - |
| SMART | SM00220 | serkin_6 | 1 | 169 | 3.5E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 200 | 18.746643 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 77 | 89 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04062 (Chemokine signaling pathway)
map04062 (Chemokine signaling pathway)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04340 (Hedgehog signaling pathway)
map04340 (Hedgehog signaling pathway)
ko04341 (Hedgehog signaling pathway - fly)
map04341 (Hedgehog signaling pathway - fly)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04550 (Signaling pathways regulating pluripotency of stem cells)
map04550 (Signaling pathways regulating pluripotency of stem cells)
map04657 (IL-17 signaling pathway)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
ko04711 (Circadian rhythm - fly)
map04711 (Circadian rhythm - fly)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06390.1 | GSK3/SHAGGY-like protein kinase 1. encodes a GSK3/shaggy-like protein kinase. Gene expression is induced by NaCl and ABA but not KCl, suggesting that this gene may be involved in response to osmotic stress. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. | 0 |
| RefSeq | XP_020270693.1 | shaggy-related protein kinase eta-like [Asparagus officinalis] | 0 |
| Q39012 | Shaggy-related protein kinase iota OS=Arabidopsis thaliana OX=3702 GN=ASK9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1ER24 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F8440 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg36298 |
| Amaranthaceae | Suaeda glauca | 6 | Sgl04570, Sgl11017, Sgl21357, Sgl26687, Sgl53601, Sgl58861 |
| Apiaceae | Apium graveolens | 1 | Ag6G00064 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_06.844.V1.1 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G20344 |
| Poaceae | Echinochloa crus-galli | 1 | AH04.397 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0545240.1 |