Basic Information
Locus ID:
AsparagusV1_06.841.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Universal stress protein family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 18964971 | 18979176 | - | AsparagusV1_06.841.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 64,151.03 Da | 50.67 | 74.86 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 22 | 161 | 4.05011E-52 | - |
| Pfam | PF00582 | Universal stress protein family | 24 | 150 | 9.1E-11 | IPR006016 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 429 | 571 | 2.3E-29 | IPR001245 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 24 | 136 | 4.77E-13 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 404 | 573 | 4.18E-49 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 497 | 574 | 6.8E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 402 | 496 | 1.7E-26 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 159 | 1.7E-13 | IPR014729 |
| SMART | SM00220 | serkin_6 | 424 | 574 | 2.1E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 424 | 574 | 28.032682 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 542 | 554 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 233 | - | - |
| Coils | Coil | Coil | 335 | 377 | - | - |
| Coils | Coil | Coil | 297 | 317 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_020270689.1 | U-box domain-containing protein 35-like, partial [Asparagus officinalis] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1EMS4 | Protein kinase domain-containing protein (Fragment) OS=Asparagus officinalis OX=4686 GN=A4U43_C06F8410 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology