Basic Information
Locus ID:
AsparagusV1_06.554.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 10826388 | 10834773 | + | AsparagusV1_06.554.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 71,494.47 Da | 39.29 | 103.80 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 120 | 179 | 5.4E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 302 | 571 | 1.5E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 7.4E-12 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 277 | 575 | 1.04E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 199 | 9.83E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 270 | 377 | 9.3E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 210 | 1.5E-54 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 592 | 2.8E-65 | - |
| SMART | SM00220 | serkin_6 | 301 | 574 | 2.5E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 301 | 580 | 36.880566 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 120 | 143 | 7.072797 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 424 | 436 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 307 | 329 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 166 | 179 | 4.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 121 | 134 | 4.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_020268820.1 | protein NSP-INTERACTING KINASE 3-like [Asparagus officinalis] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EM17 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F5540 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology