Basic Information
Locus ID:
AsparagusV1_06.342.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
(E 0.0) protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 5704510 | 5712358 | - | AsparagusV1_06.342.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 123,467.89 Da | 48.71 | 71.08 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 161 | 257 | 3.13293E-46 | - |
| CDD | cd13999 | STKc_MAP3K-like | 859 | 1116 | 1.45384E-116 | - |
| Pfam | PF00564 | PB1 domain | 174 | 258 | 5.9E-21 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 854 | 1116 | 3.8E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 845 | 1115 | 1.34E-79 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 174 | 265 | 3.08E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 940 | 1129 | 1.4E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 840 | 939 | 1.0E-26 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 176 | 259 | 3.1E-12 | - |
| SMART | SM00220 | serkin_6 | 853 | 1122 | 5.2E-61 | IPR000719 |
| SMART | SM00666 | PB1_new | 172 | 259 | 1.1E-31 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 853 | 1121 | 41.884003 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 859 | 884 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 978 | 990 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1087 | 1109 | 8.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 935 | 948 | 8.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 972 | 990 | 8.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1043 | 1065 | 8.7E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 124 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_020269648.1 | uncharacterized protein LOC109844889 [Asparagus officinalis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1ELF2 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F3420 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology