Basic Information
Locus ID:
AsparagusV1_06.326.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 5547984 | 5561768 | + | AsparagusV1_06.326.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 83,320.49 Da | 49.50 | 86.52 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 447 | 718 | 8.1E-38 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 176 | 235 | 2.4E-10 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 426 | 718 | 1.52E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 114 | 273 | 7.48E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 524 | 746 | 1.2E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 407 | 522 | 1.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 61 | 287 | 3.8E-39 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 126 | 152 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 222 | 244 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 221 | 8.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 197 | 12.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 445 | 722 | 33.884159 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 198 | 211 | 4.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 129 | 142 | 4.9E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 294 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_020269650.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Asparagus officinalis] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EN70 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F3260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology