Basic Information
Locus ID:
AsparagusV1_06.23.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 469759 | 475537 | + | AsparagusV1_06.23.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 45,447.25 Da | 37.20 | 85.37 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 52 | 319 | 2.80148E-101 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 49 | 246 | 1.1E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 317 | 8.09E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 122 | 331 | 4.4E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 16 | 121 | 1.4E-36 | - |
| SMART | SM00220 | serkin_6 | 46 | 293 | 2.0E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 46 | 333 | 38.477707 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 52 | 74 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020269570.1 | LOW QUALITY PROTEIN: putative serine/threonine-protein kinase [Asparagus officinalis] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1ELQ0 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F230 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology