Basic Information
Locus ID:
AsparagusV1_06.187.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 3034595 | 3041843 | + | AsparagusV1_06.187.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.52 | 34,749.31 Da | 59.20 | 86.11 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 31 | 60 | 2.1E-7 | IPR001810 |
| Pfam | PF00646 | F-box domain | 237 | 265 | 1.0E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 28 | 88 | 2.09E-13 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 230 | 269 | 6.15E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 230 | 267 | 1.9E-7 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 25 | 60 | 7.4E-9 | - |
| SMART | SM00256 | fbox_2 | 24 | 64 | 1.8E-6 | IPR001810 |
| SMART | SM00256 | fbox_2 | 231 | 271 | 0.0017 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70970.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_020269169.1 | putative F-box protein At3g23960 [Asparagus officinalis] | 0 |
| Q9SSK2 | Putative F-box protein At1g70970 OS=Arabidopsis thaliana OX=3702 GN=At1g70970 PE=4 SV=1 | 0 | |
| TrEMBL | A0A5P1EIT7 | F-box domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F1870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology