Basic Information
Locus ID:
AsparagusV1_06.1414.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 46004640 | 46037140 | - | AsparagusV1_06.1414.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 50,136.29 Da | 29.64 | 95.74 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 232 | 440 | 8.6E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 205 | 439 | 1.62E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 189 | 304 | 4.4E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 305 | 449 | 2.6E-41 | - |
| SMART | SM00220 | serkin_6 | 229 | 451 | 3.8E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 229 | 451 | 36.414143 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 235 | 257 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 349 | 361 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.2 | - | 0 |
| RefSeq | XP_020268892.1 | LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Asparagus officinalis] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5P1ELU3 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F14140 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology