Basic Information
Locus ID:
AsparagusV1_06.1392.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 44679055 | 44745988 | + | AsparagusV1_06.1392.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 101,156.22 Da | 47.92 | 81.33 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 633 | 766 | 8.06448E-24 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 635 | 765 | 3.2E-37 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 789 | 823 | 1.2E-10 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 595 | 824 | 4.5E-59 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 594 | 766 | 3.1E-93 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 767 | 827 | 3.1E-93 | - |
| SMART | SM00382 | AAA_5 | 631 | 768 | 7.9E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 738 | 757 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 509 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 838 | 922 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 528 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 868 | 883 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 884 | 909 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_020270929.1 | putative cell division cycle ATPase [Asparagus officinalis] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1EMR6 | AAA domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F13920 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology