Basic Information
Locus ID:
AsparagusV1_06.1286.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 38156211 | 38164025 | - | AsparagusV1_06.1286.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 57,242.54 Da | 49.37 | 88.97 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 231 | 483 | 2.6E-22 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 62 | 3.2E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 208 | 483 | 3.12E-34 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 303 | 494 | 5.4E-28 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 189 | 301 | 8.3E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 220 | 501 | 13.842146 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 142 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_020269901.1 | protein MALE DISCOVERER 2-like isoform X1 [Asparagus officinalis] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1ELI2 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F12860 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology