Basic Information
Locus ID:
AsparagusV1_06.1281.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 38050678 | 38061746 | - | AsparagusV1_06.1281.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 68,339.88 Da | 41.97 | 97.18 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 304 | 573 | 8.5E-44 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 131 | 150 | 0.1 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 79 | 5.4E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 204 | 2.1E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 283 | 574 | 3.33E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 377 | 591 | 3.2E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 221 | 2.1E-53 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 376 | 7.7E-36 | - |
| SMART | SM00220 | serkin_6 | 301 | 576 | 4.4E-32 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 131 | 153 | 7.788962 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 301 | 576 | 37.488327 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 307 | 329 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 423 | 435 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020269174.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Asparagus officinalis] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EMH9 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F12810 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology