Basic Information
Locus ID:
AsparagusV1_06.1238.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 34767673 | 34777252 | - | AsparagusV1_06.1238.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.59 | 67,463.18 Da | 43.44 | 86.58 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 451 | 596 | 3.2E-33 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 430 | 598 | 4.05E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 522 | 606 | 6.3E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 434 | 521 | 2.3E-16 | - |
| SMART | SM00220 | serkin_6 | 443 | 609 | 3.1E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 443 | 609 | 27.735867 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 567 | 579 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 74 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020271210.1 | dual specificity protein kinase splB-like [Asparagus officinalis] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EME0 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F12380 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology