Basic Information
Locus ID:
AsparagusV1_06.1208.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 33263182 | 33264844 | + | AsparagusV1_06.1208.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 53,654.38 Da | 32.19 | 101.70 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 61 | 1.4E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 69 | 123 | 4.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 219 | 270 | 5.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 283 | 342 | 8.4E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 282 | 466 | 3.66E-37 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 55 | 343 | 3.22E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 259 | 323 | 2.0E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 484 | 7.1E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 202 | 5.8E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 138 | 7.9E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 203 | 258 | 2.3E-14 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 329 | 353 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 305 | 328 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 87 | 111 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 184 | 208 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 233 | 257 | 27.0 | IPR003591 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_020269285.1 | receptor-like protein kinase HSL1 [Asparagus officinalis] | 0 |
| Q9LH52 | Leucine-rich repeat protein FLOR 1 OS=Arabidopsis thaliana OX=3702 GN=FLR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EPS2 | LRRNT_2 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F12080 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology