Basic Information
Locus ID:
AsparagusV1_06.1136.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 30187112 | 30189600 | + | AsparagusV1_06.1136.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.83 | 68,843.14 Da | 43.78 | 101.49 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 258 | 278 | 0.8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 167 | 376 | 1.18E-29 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 335 | 589 | 6.28E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 439 | 495 | 2.1E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 496 | 627 | 1.1E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 231 | 4.7E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 232 | 434 | 1.2E-35 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 207 | 232 | 0.0013 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 181 | 206 | 0.0069 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 498 | 523 | 34.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 365 | 390 | 13.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 445 | 470 | 14.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 551 | 575 | 15.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 233 | 258 | 0.013 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 339 | 364 | 0.76 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 391 | 416 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 286 | 310 | 500.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 471 | 496 | 0.057 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 259 | 284 | 0.069 | IPR006553 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 22 | 5.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 75 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_020269843.1 | EIN3-binding F-box protein 1-like [Asparagus officinalis] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1ERS9 | F-box domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F11360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology