Basic Information
Locus ID:
AsparagusV1_05.3403.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 128153421 | 128153917 | + | AsparagusV1_05.3403.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 14,489.69 Da | 58.73 | 87.22 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 13 | 121 | 2.97E-13 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 4 | 118 | 2.7E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 133 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80870.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020265767.1 | LOW QUALITY PROTEIN: putative receptor-like protein kinase At1g80870 [Asparagus officinalis] | 0 |
| Q9SAH3 | Putative receptor-like protein kinase At1g80870 OS=Arabidopsis thaliana OX=3702 GN=At1g80870 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5P1EWJ2 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F34030 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg13459, jg27130 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_14041 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g062360 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg59448, Sbi_jg63204 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23687 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020692 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl02834, Sgl07956 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000012777, gene:ENSEOMG00000030400 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0022200, CQ.Regalona.r1.3BG0022940 |
| Apiaceae | Apium graveolens | 1 | Ag9G01203 |
| Arecaceae | Cocos nucifera | 1 | COCNU_01G014960 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103723813 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.3403.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri10G29790 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G80870.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10018204m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g34870.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g075260.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G0414 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G0441 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g09920 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-685 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.745 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00032852 |
| Poaceae | Echinochloa crus-galli | 2 | AH08.958, CH08.1107 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0624810, gene-QOZ80_8BG0653160 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0088790.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_032246 |
| Poaceae | Oryza coarctata | 2 | Oco15G005440, Oco16G005170 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g17320.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G105600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0403058 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr16G003770, Chr17G003450 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G664300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG059210, gene_TRIDC1BG067960 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G401900.1.cds1, TraesCS1B02G430500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb412320_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-44763, nbis-gene-49497 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g22747, Zma_g23892 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.252, evm.TU.LG09.1491 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g13100 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_18_RagTag.225 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-28352 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13222 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7697 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000023l.138 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00019045 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-22423 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-21503 |
| Salicaceae | Populus euphratica | 2 | populus_peu04116, populus_peu34941 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132633078 |
| Solanaceae | Solanum chilense | 1 | SOLCI002579500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107012306 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.15066_chr08_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G0766 |
| Zosteraceae | Zostera marina | 1 | Zosma03g06480.v3.1 |