Basic Information
Locus ID:
AsparagusV1_05.3297.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 125690018 | 125693084 | - | AsparagusV1_05.3297.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 85,529.99 Da | 45.74 | 89.45 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04548 | AIG1 family | 163 | 309 | 1.1E-23 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 490 | 753 | 1.0E-103 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 155 | 315 | 7.89E-21 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 141 | 390 | 1.3E-56 | IPR027417 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 159 | 389 | 29.333584 | IPR006703 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_020265631.1 | translocase of chloroplast 90, chloroplastic-like [Asparagus officinalis] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EWA4 | AIG1-type G domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F32970 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology