Basic Information
Locus ID:
AsparagusV1_05.3280.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 125308706 | 125319566 | - | AsparagusV1_05.3280.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 39,804.13 Da | 41.39 | 87.98 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 47 | 314 | 2.34961E-110 | - |
| Pfam | PF00069 | Protein kinase domain | 42 | 309 | 4.4E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 312 | 1.3E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 116 | 3.9E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 117 | 326 | 6.0E-62 | - |
| SMART | SM00220 | serkin_6 | 41 | 312 | 3.8E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 41 | 321 | 37.573132 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 47 | 69 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 163 | 175 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 357 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020265609.1 | PTI1-like tyrosine-protein kinase At3g15890 [Asparagus officinalis] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1EW76 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F32800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology