Basic Information
Locus ID:
AsparagusV1_05.3218.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 123577458 | 123581589 | - | AsparagusV1_05.3218.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 44,076.43 Da | 54.43 | 79.74 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 99 | 346 | 7.82166E-124 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 94 | 346 | 2.5E-67 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 81 | 346 | 5.8E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 175 | 370 | 1.9E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 81 | 174 | 1.4E-22 | - |
| SMART | SM00220 | serkin_6 | 92 | 353 | 4.0E-67 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 92 | 353 | 42.887516 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 214 | 226 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 273 | 295 | 6.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 170 | 183 | 6.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 254 | 264 | 6.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 208 | 226 | 6.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 317 | 339 | 6.3E-19 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 40 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020268125.1 | serine/threonine-protein kinase HT1 [Asparagus officinalis] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EYL5 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F32180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology