Basic Information
Locus ID:
AsparagusV1_05.3184.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 122777562 | 122795676 | + | AsparagusV1_05.3184.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 132,572.27 Da | 37.55 | 84.85 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 392 | 662 | 3.68761E-88 | - |
| Pfam | PF00759 | Glycosyl hydrolase family 9 | 718 | 1179 | 3.4E-148 | IPR001701 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 389 | 659 | 1.8E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 66 | 6.4E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 362 | 659 | 6.7E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 210 | 2.47E-34 | - |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 716 | 1186 | 6.38E-156 | IPR008928 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 251 | 4.7E-41 | IPR032675 |
| Gene3D | G3DSA:1.50.10.10 | - | 713 | 1196 | 5.5E-171 | IPR012341 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 686 | 1.6E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 463 | 2.5E-27 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 115 | 137 | 7.041994 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 93 | 114 | 7.473233 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 386 | 662 | 38.053688 | IPR000719 |
| ProSitePatterns | PS00592 | Glycosyl hydrolases family 9 (GH9) active site signature 2. | 1082 | 1108 | - | IPR018221 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32990.1 | glycosyl hydrolase 9B8. | 0 |
| RefSeq | XP_020265513.1 | LOW QUALITY PROTEIN: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Asparagus officinalis] | 0 |
| O48766 | Endoglucanase 11 OS=Arabidopsis thaliana OX=3702 GN=At2g32990 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1EWN0 | Endoglucanase OS=Asparagus officinalis OX=4686 GN=A4U43_C05F31840 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology