Basic Information
Locus ID:
AsparagusV1_05.3040.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 119084813 | 119118182 | + | AsparagusV1_05.3040.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 82,732.30 Da | 37.96 | 96.39 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 273 | 657 | 1.6E-57 | IPR006153 |
| Pfam | PF01496 | V-type ATPase 116kDa subunit family | 124 | 168 | 6.1E-19 | IPR002490 |
| Pfam | PF02867 | Ribonucleotide reductase, barrel domain | 210 | 243 | 2.9E-8 | IPR000788 |
| SUPERFAMILY | SSF51998 | PFL-like glycyl radical enzymes | 199 | 239 | 1.92E-7 | - |
| Gene3D | G3DSA:3.20.70.20 | - | 187 | 279 | 8.8E-11 | - |
| Gene3D | G3DSA:6.10.140.1330 | - | 359 | 411 | 3.8E-14 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 312 | 326 | 1.4E-8 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 367 | 377 | 1.4E-8 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 298 | 309 | 1.4E-8 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 327 | 335 | 1.4E-8 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_020265346.1 | sodium/hydrogen exchanger 4-like isoform X1 [Asparagus officinalis] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1EW91 | Sodium/hydrogen exchanger OS=Asparagus officinalis OX=4686 GN=A4U43_C05F30400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology