Basic Information
Locus ID:
AsparagusV1_05.2856.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 114235556 | 114239234 | - | AsparagusV1_05.2856.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 107,915.22 Da | 36.23 | 102.79 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 88 | 149 | 6.8E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 163 | 222 | 5.6E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 60 | 4.3E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 685 | 953 | 5.5E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 674 | 956 | 6.74E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 300 | 1.58E-51 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 215 | 574 | 6.36E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 304 | 1.7E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 308 | 616 | 2.4E-80 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 198 | 7.7E-47 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 978 | 2.7E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 667 | 767 | 4.8E-24 | - |
| SMART | SM00220 | serkin_6 | 683 | 965 | 1.6E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 683 | 965 | 36.612019 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 812 | 824 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 689 | 719 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 964 | 990 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_020265116.1 | receptor-like protein kinase HSL1 [Asparagus officinalis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EZN0 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F28560 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology