Basic Information
Locus ID:
AsparagusV1_05.2801.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Mitogen-activated protein kinase kinase kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 112468504 | 112474026 | + | AsparagusV1_05.2801.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 54,545.59 Da | 53.96 | 82.45 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 106 | 332 | 3.3E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 101 | 345 | 2.29E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 85 | 343 | 6.5E-55 | - |
| SMART | SM00220 | serkin_6 | 75 | 332 | 4.7E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 75 | 332 | 35.792248 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | 7.0 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 195 | 207 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G36950.1 | mitogen-activated protein kinase kinase kinase 21. member of MEKK subfamily | 0 |
| RefSeq | XP_020266864.1 | mitogen-activated protein kinase kinase kinase 3-like [Asparagus officinalis] | 0 |
| O80888 | Mitogen-activated protein kinase kinase kinase 17 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EZC3 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F28010 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 6 | AsparagusV1_04.1263.V1.1, AsparagusV1_05.2801.V1.1 ... |