Basic Information
Locus ID:
AsparagusV1_05.2682.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 109151997 | 109156881 | - | AsparagusV1_05.2682.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 88,975.51 Da | 38.94 | 100.87 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 604 | 764 | 2.0E-24 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 522 | 589 | 1.2E-9 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 357 | 378 | 0.067 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 10 | 257 | 4.19E-39 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 202 | 424 | 1.34E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 515 | 766 | 9.17E-60 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 484 | 587 | 7.8E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 588 | 785 | 2.0E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 453 | 5.1E-74 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 5 | 143 | 4.3E-30 | IPR032675 |
| SMART | SM00220 | serkin_6 | 520 | 767 | 3.1E-18 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 354 | 377 | 80.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 378 | 402 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 166 | 99.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 520 | 767 | 27.84894 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 526 | 551 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 618 | 630 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 145 | 158 | 8.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 378 | 391 | 8.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_020266819.1 | LOW QUALITY PROTEIN: receptor-like protein kinase 5 [Asparagus officinalis] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EUR5 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F26820 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology