Basic Information
Locus ID:
AsparagusV1_05.2646.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 108128781 | 108150990 | + | AsparagusV1_05.2646.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 119,102.11 Da | 48.61 | 76.55 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 552 | 868 | 1.8E-103 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 16 | 117 | 9.4E-10 | IPR001715 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 546 | 908 | 3.44E-117 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 12 | 119 | 1.38E-13 | IPR036872 |
| Gene3D | G3DSA:1.10.418.10 | - | 9 | 120 | 4.1E-15 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 488 | 872 | 3.0E-127 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 544 | 878 | 2.8E-155 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 11 | 118 | 15.944366 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 546 | 870 | 110.873672 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 770 | 781 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 740 | 757 | 1.1E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 621 | 642 | 1.1E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 771 | 789 | 1.1E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 820 | 841 | 1.1E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 939 | 968 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1043 | 1059 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 946 | 968 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 994 | 1059 | - | - |
| Coils | Coil | Coil | 424 | 451 | - | - |
| Coils | Coil | Coil | 884 | 911 | - | - |
| Coils | Coil | Coil | 360 | 422 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.5 | - | 0 |
| RefSeq | XP_020264884.1 | kinesin-like protein KIN-14C isoform X1 [Asparagus officinalis] | 0 |
| Q5JKW1 | Kinesin-like protein KIN-14C OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14C PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1EW90 | Kinesin-4 OS=Asparagus officinalis OX=4686 GN=A4U43_C05F26460 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology