Basic Information
Locus ID:
AsparagusV1_05.2611.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 107139222 | 107145551 | - | AsparagusV1_05.2611.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 27,754.10 Da | 32.94 | 87.06 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 173 | 252 | 1.2E-7 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 184 | 252 | 2.67E-17 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 252 | 9.8E-19 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 16 | 127 | 7.5E-6 | IPR038408 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 75 | 252 | 12.428746 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 17 | 127 | 8.939399 | IPR002902 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_020264843.1 | LOW QUALITY PROTEIN: cysteine-rich receptor-like protein kinase 3 [Asparagus officinalis] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EYW7 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F26110 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for AsparagusV1_05.2611.V1.1.