Basic Information
Locus ID:
AsparagusV1_05.2587.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 106348433 | 106352584 | - | AsparagusV1_05.2587.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 69,494.59 Da | 35.41 | 93.64 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 113 | 173 | 2.2E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 302 | 567 | 9.1E-43 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 62 | 1.5E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 186 | 7.78E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 278 | 568 | 4.99E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 269 | 372 | 3.6E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 204 | 3.6E-54 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 373 | 587 | 4.3E-61 | - |
| SMART | SM00220 | serkin_6 | 297 | 553 | 1.3E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 573 | 35.396496 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 325 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 415 | 427 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 616 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 609 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 579 | 609 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020264800.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X1 [Asparagus officinalis] | 0 |
| Q0WVM4 | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EUI4 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F25870 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology