Basic Information
Locus ID:
AsparagusV1_05.2164.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 92436378 | 92443620 | + | AsparagusV1_05.2164.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.22 | 73,461.70 Da | 50.15 | 82.60 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 328 | 622 | 6.75177E-128 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 297 | 608 | 1.4E-93 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 328 | 633 | 5.34E-71 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 331 | 630 | 1.6E-44 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 146 | - | - |
| Coils | Coil | Coil | 259 | 279 | - | - |
| Coils | Coil | Coil | 132 | 152 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_020264312.1 | probable galacturonosyltransferase 4 [Asparagus officinalis] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1ETK8 | Hexosyltransferase OS=Asparagus officinalis OX=4686 GN=A4U43_C05F21640 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology