Basic Information
Locus ID:
AsparagusV1_05.2015.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Thiamine pyrophosphate enzyme, central domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 86869896 | 86873084 | - | AsparagusV1_05.2015.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 46,195.38 Da | 33.32 | 88.42 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 220 | 402 | 1.65015E-79 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 55 | 172 | 3.2E-21 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 265 | 390 | 1.1E-17 | IPR011766 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 50 | 196 | 1.53E-32 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 220 | 414 | 3.04E-45 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 213 | 404 | 1.5E-57 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 44 | 207 | 1.5E-41 | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_010912563.1 | pyruvate decarboxylase 1 [Elaeis guineensis] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1ET06 | pyruvate decarboxylase OS=Asparagus officinalis OX=4686 GN=A4U43_C05F20150 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology