Basic Information
Locus ID:
AsparagusV1_05.1890.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 82822755 | 82833197 | + | AsparagusV1_05.1890.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 74,166.16 Da | 39.76 | 91.93 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 392 | 637 | 4.3E-20 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 68 | 1.9E-12 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 159 | 4.68E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 416 | 638 | 8.17E-36 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 351 | 458 | 1.7E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 192 | 2.0E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 460 | 650 | 1.3E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 256 | 642 | 18.02581 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 302 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020263974.1 | protein MALE DISCOVERER 2-like [Asparagus officinalis] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1ETR6 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F18900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology