Basic Information
Locus ID:
AsparagusV1_05.1822.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
protein At1g32220, chloroplastic-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 80099864 | 80115875 | + | AsparagusV1_05.1822.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 11,905.61 Da | 35.38 | 84.38 | 0.04 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10730.1 | NAD(P)-binding Rossmann-fold superfamily protein. | 0 |
| RefSeq | XP_020265455.1 | uncharacterized protein At1g32220, chloroplastic-like isoform X4 [Asparagus officinalis] | 0 |
| Q9FVR6 | Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g32220 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EWD7 | Epimerase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F18220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31112 |
| Asparagaceae | Asparagus officinalis | 4 | AsparagusV1_03.2897.V1.1, AsparagusV1_04.934.V1.1 ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G2321 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl05G1692, Cgl05G2457, Cgl05G2491 |
| Poaceae | Echinochloa crus-galli | 1 | BH01.1045 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2AG0109500 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0006820.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_066036 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-17336 |