Basic Information
Locus ID:
AsparagusV1_05.1662.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 72782371 | 72787265 | + | AsparagusV1_05.1662.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 48,001.09 Da | 33.30 | 64.36 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 230 | 314 | 8.9E-24 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 193 | - | - |
| Coils | Coil | Coil | 245 | 275 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_020268421.1 | protein WVD2-like 4 isoform X1 [Asparagus officinalis] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5P1ESB3 | TPX2 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F16620 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology