Basic Information
Locus ID:
AsparagusV1_05.1391.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 59011909 | 59013784 | - | AsparagusV1_05.1391.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 29,260.92 Da | 53.28 | 79.89 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 46 | 106 | 6.7E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 183 | 7.86E-27 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 109 | 236 | 3.2E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 4.7E-18 | - |
| SMART | SM00219 | tyrkin_6 | 21 | 218 | 0.0074 | IPR020635 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 207 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020246801.1 | LOW QUALITY PROTEIN: probable inactive receptor kinase At1g27190 [Asparagus officinalis] | 0 |
| O04567 | Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana OX=3702 GN=At1g27190 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EU17 | TyrKc domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F13910 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30174020 |
| Asparagaceae | Asparagus officinalis | 9 | AsparagusV1_03.202.V1.1, AsparagusV1_04.769.V1.1 ... |