Basic Information
Locus ID:
AsparagusV1_05.1382.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 58500237 | 58508512 | - | AsparagusV1_05.1382.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 27,474.14 Da | 40.72 | 82.70 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 46 | 106 | 2.1E-7 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 196 | 6.04E-30 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 83 | 1.0E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 234 | 1.3E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 230 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G28450.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020246801.1 | LOW QUALITY PROTEIN: probable inactive receptor kinase At1g27190 [Asparagus officinalis] | 0 |
| Q9LSI9 | Inactive LRR receptor-like serine/threonine-protein kinase BIR2 OS=Arabidopsis thaliana OX=3702 GN=BIR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EWV1 | PK_Tyr_Ser-Thr domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F13820 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30174020 |
| Asparagaceae | Asparagus officinalis | 9 | AsparagusV1_03.202.V1.1, AsparagusV1_04.769.V1.1 ... |