Basic Information
Locus ID:
AsparagusV1_05.1294.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 53534658 | 53543105 | - | AsparagusV1_05.1294.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 90,787.47 Da | 49.32 | 82.59 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 94 | 290 | 1.61828E-102 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 108 | 267 | 5.8E-13 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 272 | 767 | 4.8E-168 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 85 | 300 | 1.44E-61 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 624 | 745 | 4.58E-33 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 343 | 602 | 5.01E-64 | IPR020568 |
| Gene3D | G3DSA:1.20.120.790 | - | 602 | 749 | 2.0E-52 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 515 | 601 | 4.4E-33 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 70 | 315 | 2.6E-89 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 341 | 514 | 4.8E-51 | - |
| SMART | SM00387 | HKATPase_4 | 107 | 269 | 3.0E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 63 | 788 | 1.1E-213 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 105 | 114 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 202 | 224 | 1.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 276 | 294 | 1.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 155 | 172 | 1.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 85 | 105 | 1.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 257 | 274 | 1.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 173 | 190 | 1.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 106 | 128 | 1.1E-62 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 76 | 746 | 23.986166 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 783 | 798 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 798 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_020267789.1 | heat shock protein 90-5, chloroplastic [Asparagus officinalis] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1ERU0 | HATPase_c domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F12940 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology