Basic Information
Locus ID:
AsparagusV1_05.1267.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 52040143 | 52095543 | - | AsparagusV1_05.1267.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.70 | 57,251.67 Da | 31.08 | 113.63 | 0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 24 | 440 | 7.0E-60 | IPR006153 |
| Gene3D | G3DSA:1.20.1530.20 | - | 18 | 448 | 4.1E-15 | IPR038770 |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 21 | 453 | 1.6E-76 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 94 | 108 | 3.2E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 109 | 117 | 3.2E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 149 | 159 | 3.2E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 80 | 91 | 3.2E-9 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_020268011.1 | sodium/hydrogen exchanger 4-like [Asparagus officinalis] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1ER82 | Sodium/hydrogen exchanger OS=Asparagus officinalis OX=4686 GN=A4U43_C05F12670 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology