Basic Information
Locus ID:
AsparagusV1_05.1187.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 46818193 | 46821813 | + | AsparagusV1_05.1187.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 129,386.50 Da | 34.27 | 95.22 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 908 | 1177 | 1.04711E-99 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 62 | 1.7E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 314 | 374 | 6.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 695 | 753 | 1.2E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 904 | 1172 | 2.6E-45 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 70 | 401 | 2.82E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 888 | 1183 | 2.7E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 439 | 785 | 5.95E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 867 | 977 | 5.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 162 | 786 | 1.6E-269 | IPR032675 |
| Gene3D | G3DSA:3.30.1490.310 | - | 609 | 666 | 1.6E-269 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 17 | 160 | 1.2E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 978 | 1193 | 9.5E-58 | - |
| SMART | SM00220 | serkin_6 | 902 | 1174 | 1.8E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 902 | 1177 | 38.774521 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 908 | 931 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1021 | 1033 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55610.1 | BRI1 like. mutant has Altered vascular cell differentiation; LRR Receptor Kinase | 0 |
| RefSeq | XP_020267578.1 | brassinosteroid LRR receptor kinase BRL1-like [Asparagus officinalis] | 0 |
| Q69JN6 | Brassinosteroid LRR receptor kinase BRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1ER22 | non-specific serine/threonine protein kinase OS=Asparagus officinalis OX=4686 GN=A4U43_C05F11870 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology