Basic Information
Locus ID:
AsparagusV1_05.1104.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 41674204 | 41678141 | + | AsparagusV1_05.1104.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.15 | 23,605.60 Da | 36.06 | 73.76 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 78 | 157 | 4.0E-9 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 78 | 189 | 3.27E-16 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 48 | 149 | 2.5E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 213 | 9.644348 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50610.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020266281.1 | pollen receptor-like kinase 4 [Asparagus officinalis] | 0 |
| Q40902 | Pollen receptor-like kinase 1 OS=Petunia integrifolia OX=4103 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1ERV8 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F11040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.1104.V1.1 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-8250 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17330 |