Basic Information
Locus ID:
AsparagusV1_05.1103.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 41673283 | 41673957 | + | AsparagusV1_05.1103.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 24,225.07 Da | 20.67 | 85.31 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 120 | 179 | 4.6E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 68 | 8.4E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 213 | 3.02E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 217 | 5.9E-41 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020266281.1 | pollen receptor-like kinase 4 [Asparagus officinalis] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EQV0 | LRRNT_2 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F11030 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology