Basic Information
Locus ID:
AsparagusV1_05.1081.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
receptor-like protein kinase At2g42960
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 40826259 | 40830849 | - | AsparagusV1_05.1081.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.31 | 56,345.44 Da | 40.14 | 89.50 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 192 | 458 | 1.16813E-102 | - |
| Pfam | PF00069 | Protein kinase domain | 187 | 454 | 2.8E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 169 | 459 | 2.02E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 170 | 261 | 1.1E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 262 | 474 | 1.7E-63 | - |
| SMART | SM00220 | serkin_6 | 186 | 464 | 1.5E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 186 | 465 | 38.647316 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 192 | 215 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 308 | 320 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 504 | - | - |
| Coils | Coil | Coil | 206 | 226 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020267330.1 | probable receptor-like protein kinase At2g42960 [Asparagus officinalis] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5P1EUH7 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F10810 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology