Basic Information
Locus ID:
AsparagusV1_04.912.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 22745659 | 22755109 | - | AsparagusV1_04.912.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 68,859.64 Da | 41.45 | 74.78 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 490 | 606 | 3.1E-10 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 294 | 486 | 3.27E-23 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 489 | 605 | 8.71E-18 | IPR029063 |
| Gene3D | G3DSA:1.10.8.10 | - | 63 | 118 | 1.0E-5 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 236 | 377 | 3.1E-6 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 479 | 613 | 6.5E-29 | - |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 286 | 613 | 135.300461 | IPR030380 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 489 | 613 | 21.036789 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 58 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15380.1 | domains rearranged methylase 1. Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences. | 0 |
| RefSeq | XP_020260564.1 | DNA (cytosine-5)-methyltransferase DRM2-like [Asparagus officinalis] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1F186 | SAM-dependent MTase DRM-type domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F9120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology