Basic Information
Locus ID:
AsparagusV1_04.896.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
mitogen-activated protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 22163843 | 22166088 | + | AsparagusV1_04.896.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 22,273.09 Da | 37.58 | 83.32 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 67 | 189 | 3.6E-22 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 61 | 189 | 4.76E-29 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 49 | 192 | 1.8E-42 | - |
| SMART | SM00220 | serkin_6 | 67 | 192 | 9.4E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 67 | 193 | 18.039944 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18040.5 | - | 0 |
| RefSeq | XP_020243281.1 | mitogen-activated protein kinase 9-like [Asparagus officinalis] | 0 |
| Q9LV37 | Mitogen-activated protein kinase 9 OS=Arabidopsis thaliana OX=3702 GN=MPK9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1F231 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F8960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 7 | AsparagusV1_02.1391.V1.1, AsparagusV1_04.2346.V1.1 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g010910.2N |
| Poaceae | Zea mays | 1 | Zm00001eb025520_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-13596, nbis-gene-24744, nbis-gene-40726 |